#!/bin/bash

# Make a connectivity directory
mkdir -p connectivity

# Change to the connectivity directory
cd connectivity

# Symbollically link required files
ln -sf ../grid_files/grid.in
ln -sf ../grid_files/grid.bc.in 
ln -sf ../grid_files/grid.b2b 
ln -sf ../input_files/connectivity.yaml 

# Run the connectivity executable by providing an
# input file 'connectivity.yaml' and outputting
# the results to a file called connectivity.out
$lavacurv connectivity.yaml | tee connectivity.out